Topology Data Bank of Transmembrane Proteins
Topology, Structure and Prediction.

Database status

Database release: v3.3
Release date: 2025-01-12
Entries: 9588
Topology data: 685414
Alpha helical proteins: 9310
Beta barrel proteins: 279
PubMed links: 43320
PDB links: 31246
Visitors: 1005760

Download

XML files

Description Download
All TOPDB entries in one xml file All
Alpha bitopic TOPDB entries in one xml file AB
Alpha polytopic TOPDB entries in one xml file AP
Beta barrel TOPDB entries in one xml file BP

Repository

  • Export the latest version of TOPDB:
    >svn export http://svn.enzim.hu/topdb/topdb_releases
  • Checkout the latest working copy of TOPDB:
    >svn checkout http://svn.enzim.hu/topdb/topdb_releases
  • Update to the latest version of TOPDB:
    >cd working_copy_of_topdb; svn update
  • Get an old release:
    >svn export -r RELEASE_NUMBER http://svn.enzim.hu/topdb/topdb_releases